Deep generative framework to integrate RNA, ATAC, proteomics and metabolomics data where each dataset has only some modalities. Uses modality-specific encoders and decoders with a shared latent space, plus missing-not-at-random (MNAR) modeling. Adds calib

Shafin AhmedBRAC University

Project

Probability Calibration in Tree-Based Models for Healthcare Prediction

Evaluated Platt scaling and isotonic regression for tree-based models on binary and multiclass healthcare tasks. Used the CDC Diabetes Health Indicators 2023 data with ROC-AUC, Brier score, ECE and reliability diagrams.

Shafin AhmedBRAC University

Project

Breast Cancer Prediction from Gene Expression Data

Built a pipeline to classify breast cancer samples from high-dimensional RNA-seq data (TCGA-BRCA). Used log transform and mutual-information feature selection, then compared Logistic Regression, XGBoost and a Neural Network under class imbalance.

Shafin AhmedBRAC University

Project

The BookArc: Library Management System (CSE370)

Built a Flask website as a group project for cataloguing, borrowing and managing books.

Python
Flask
MySQL
HTML
CSS

Live demo